[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 937 items for (author: li & tc)

EMDB-17626:
E. coli RNA polymerase paused at ops site
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17632:
fully recruited RfaH bound to E. coli transcription complex paused at ops site (alternative state of RfaH)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17646:
transcription complex paused at ops site and bound to autoinhibited RfaH, not fully complementary scaffold
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17647:
fully recruited RfaH bound to E. coli transcription complex paused at ops site (not fully complementary scaffold; alternative state of RfaH)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17657:
E. coli RNA polymerase paused at ops site (non-complementary scaffold)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17668:
E. coli transcription complex paused at ops site with fully recruited RfaH
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17679:
autoinhibited RfaH bound to E. coli transcription complex paused at ops site (encounter complex)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17681:
backtracked E. coli transcription complex paused at ops site and bound to RfaH
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17685:
E. coli transcription complex paused at ops site and bound to RfaH and NusA
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17686:
fully recruited RfaH bound to E. coli transcription complex paused at ops site (not complementary scaffold)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8pdy:
E. coli RNA polymerase paused at ops site
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8pen:
fully recruited RfaH bound to E. coli transcription complex paused at ops site (alternative state of RfaH)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8pfg:
autoinhibited RfaH bound to E. coli transcription complex paused at ops site (encounter complex), not fully complementary scaffold
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8pfj:
fully recruited RfaH bound to E. coli transcription complex paused at ops site (not fully complementary scaffold; alternative state of RfaH)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8ph9:
E. coli RNA polymerase paused at ops site (non-complementary scaffold)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8phk:
fully recruited RfaH bound to E. coli transcription complex paused at ops site
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8pib:
autoinhibited RfaH bound to E. coli transcription complex paused at ops site (encounter complex)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8pid:
backtracked E. coli transcription complex paused at ops site and bound to RfaH
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8pil:
E. coli transcription complex paused at ops site and bound to RfaH and NusA
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8pim:
fully recruited RfaH bound to E. coli transcription complex paused at ops site (not complementary scaffold)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-42464:
chEnv TTT protein in complex with 43A2 Fab
Method: single particle / : Ozorowski G, Lee WH, Ward AB

EMDB-42468:
chEnv TTT protein in complex with CM01A Fab
Method: single particle / : Ozorowski G, Lee WH, Ward AB

EMDB-40180:
MsbA bound to cerastecin C
Method: single particle / : Chen Y, Klein D

EMDB-17870:
Structure of the transcription termination factor Rho bound to RNA at the PBS and SBS
Method: single particle / : Said N, Hilal T, Wahl MC

EMDB-17874:
Structure of the transcription termination factor Rho in complex with Rof and ADP
Method: single particle / : Said N, Hilal T, Wahl MC

EMDB-17875:
Structure of the transcription termination factor Rho in complex with Rof
Method: single particle / : Said N, Hilal T, Wahl MC

EMDB-17876:
Structure of Rho pentamer in complex with Rof and ADP
Method: single particle / : Said N, Hilal T, Wahl MC

EMDB-17877:
Structure of Rho pentamer in complex with Rof
Method: single particle / : Said N, Hilal T, Wahl MC

PDB-8ptg:
Structure of the transcription termination factor Rho bound to RNA at the PBS and SBS
Method: single particle / : Said N, Hilal T, Wahl MC

PDB-8ptm:
Structure of the transcription termination factor Rho in complex with Rof and ADP
Method: single particle / : Said N, Hilal T, Wahl MC

PDB-8ptn:
Structure of the transcription termination factor Rho in complex with Rof
Method: single particle / : Said N, Hilal T, Wahl MC

PDB-8pto:
Structure of Rho pentamer in complex with Rof and ADP
Method: single particle / : Said N, Hilal T, Wahl MC

PDB-8ptp:
Structure of Rho pentamer in complex with Rof
Method: single particle / : Said N, Hilal T, Wahl MC

EMDB-43664:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-43665:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines (cH125 TTT)
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-43666:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines (H2/1 GCN4)
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-43668:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines (H5/1 GCN4)
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-43669:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines. H5 GCN4
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-43811:
Structure of human calcium-sensing receptor in complex with chimeric Gq (miniGisq) protein in nanodiscs
Method: single particle / : Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR

EMDB-43836:
Consensus map of human CaSR-miniGisq complex in nanodiscs
Method: single particle / : Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR

EMDB-43837:
Local refinement map of CaSR extracellular domain in nanodisc-reconstituted human CaSR-miniGisq complex
Method: single particle / : Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR

EMDB-43840:
Local refinement map of CaSR transmembrane domain in nanodisc-reconstituted human CaSR-miniGisq complex
Method: single particle / : Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR

EMDB-43841:
Local refinement map of G protein in nanodisc-reconstituted human CaSR-miniGisq complex
Method: single particle / : Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR

EMDB-43897:
Consensus map of human CaSR-miniGis complex in nanodiscs
Method: single particle / : Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR

EMDB-43898:
Local refinement map of CaSR extracellular domain in nanodisc-reconstituted human CaSR-miniGis complex
Method: single particle / : Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR

EMDB-43899:
Local refinement map of CaSR transmembrane domain in nanodisc-reconstituted human CaSR-miniGis complex
Method: single particle / : Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR

EMDB-43900:
Local refinement map of G protein in nanodisc-reconstituted human CaSR-miniGis complex
Method: single particle / : Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR

EMDB-43901:
Structure of human calcium-sensing receptor in complex with chimeric Gs (miniGis) protein in nanodiscs
Method: single particle / : Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR

EMDB-43904:
Consensus map of human CaSR-Gi3 complex in nanodiscs
Method: single particle / : Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR

EMDB-43905:
Local refinement map of CaSR extracellular domain in nanodisc-reconstituted human CaSR-Gi3 complex
Method: single particle / : Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more